Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936986.1_cds_XP_016482391.1_73624
CDS Infomation

[gene=LOC107803241] [db_xref=GeneID:107803241] [protein=CAAX prenyl protease 1 homolog isoform X1] [protein_id=XP_016482391.1] [location=join(93681..93711,113730..113877,113978..114062,114145..114240,115384..115449,115549..115647,115850..115963,116068..116178,118029..118091,119426..119518,122944..123014,123150..123327,124088..124159,124272..124337,124477..124593)] [gbkey=CDS]
Sequence

ATGGCATTTCCTTACTTGGAAGCAGTTCTCGGTTTCATGATATTAATGTACATATTTGAG
ACATACCTTGATGTACGACAGCATGCTGCTCATAAATTGCCAACACTTCCGAAAACTTTG
GTAGGAGTTATCAGCCAGGAAAAATTTAAGAAGTCCCGTGCGTATAGTCTAGACAAAAGT
TACTTCCATTTTATCCACGAGTTTGTTACCATACTTATGGACTCTTCCATCTTGTACTTC
CGGATATTGCCCTGGTTTTGGAAGATATCAGGAGAATCTTTACTATACCTTGGTCTCAAC
ACAGAGAATGAAATATTTCACACTCTTTCATTTTTAGCAGGAGTAATGGTTTGGTCACAG
ATCACCGATTTGCCATTTTCATTGTATTCAACCTTTGTGATTGAGACCCGCCATGGTTTC
AACAAGCAAACAGTATGGTTATTCTTTAGGGACATGATAAAAGGAATTGCTTTAGCTATT
GTGATTGGTCCTCCCATTGTGGCTGCCATCATTGTTATAGTACAGAAAGGAGGTCCTTAC
TTGGCAATTTACTTGTGGGGGTTTATGCTGATTTTATCTCTTGCTATGATGACTATCTAC
CCTGTACTAATTGCTCCACTTTTCAACAAGTTCACTCCGCTTCCACAGGGAGAGCTTAGG
TTGAATATTGAGAATCTTGCGTCCTCACTCAAGTTTCCCCTAAAGAAATTATTCGTCGTT
GATGGGTCCACACGGTCAAGCCATAGCAATGCATACATGTATGGGTTCTTCAAGAACAAG
CGCATTGTCCTCTATGATACACTCATCCAGCAGTGCAAGAATGATGAGGAAATAGTAGCT
GTTATTGCACATGAACTGGGTCATTGGAAACTTAATCACACAATGTACTCCTTCATTGCG
GTCCAGATTCTCACATTGTTGCAGTTTGGAGGATACACTCTTGTTAGGAATTCTAAGGAT
TTGTTTCAGAGTTTTGGGTTTGATACACAACCAGTCCTTATTGGACTCATCATTTTCCAG
GTAATACTAGAAATCTGGTCAGGAGGTTTGGCTGTTAGGAGGGTTAAATACACTCTTGTT
AGGAATTCTAAGGATTTGTTTCAGAGTTTTGGGTTTGATACACAACCAGTCCTTATTGGA
CTCATCATTTTCCAGCAAACTGTGATACCTCTCCAGCACCTAGTAAGCTTTGGCCTTAAT
CTTGTAAGCCGCGCCTTTGAGTTCCAGGCTGATGCATTTGCAAAGAAGTTGGGTTATGCT
GCACCTCTTCGAGCTGGTCTTGTGAAACTGCAGGAAGAAAACTTGTCAGCTATGAACGCA
GATCCTTGGTATTCAGCCTATCATTACTCTCACCCTCCCCTAGTTGAAAGACTCGCTGCC
ATTGATGAACCTGAGAAGAAGACGGACTAA

Peptide Sequence

PEP ID

XP_016482391.1
PEP Infomation

PREDICTED: CAAX prenyl protease 1 homolog isoform X1 [Nicotiana tabacum]
Sequence

MAFPYLEAVLGFMILMYIFETYLDVRQHAAHKLPTLPKTLVGVISQEKFKKSRAYSLDKS
YFHFIHEFVTILMDSSILYFRILPWFWKISGESLLYLGLNTENEIFHTLSFLAGVMVWSQ
ITDLPFSLYSTFVIETRHGFNKQTVWLFFRDMIKGIALAIVIGPPIVAAIIVIVQKGGPY
LAIYLWGFMLILSLAMMTIYPVLIAPLFNKFTPLPQGELRLNIENLASSLKFPLKKLFVV
DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA
VQILTLLQFGGYTLVRNSKDLFQSFGFDTQPVLIGLIIFQVILEIWSGGLAVRRVKYTLV
RNSKDLFQSFGFDTQPVLIGLIIFQQTVIPLQHLVSFGLNLVSRAFEFQADAFAKKLGYA
APLRAGLVKLQEENLSAMNADPWYSAYHYSHPPLVERLAAIDEPEKKTD

Transcript Sequence

Gene sequence data has not been registered.